Tips

Open-source wheels for PyMOL 3.0.x have been released in April 9, 2024, and the software distribution method has been changed. Former installation methods ^{1 2} could not work at all. Here provides a new walk through to install open-source PyMOL 3.0.x in Windows 11.

The method to install PyMOL in Windows 11 is out of date. Please refer to the most recent post: Install Open Source PyMOL 3.0.x in Windows 11.

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The way to install open source PyMOL in the previous post can not work in Windows 11. The PyMOLWiki described the method to install PyMOL in windows. Here we provided more details of the installation.

This post is a walkthrough to setup and connect Visual Studio Code to remote server over Intranet or behind a firewall.

This post was first released at 2019-05-26, and updated at 2021-04-20.

Since PyMOL 2.x released, there were no binary installer avaliable for Windows.

PyMOL Wiki provides the way to install open source PyMOL in Windows under Python 3.x.

This post provided the method to install PyMOL 2.x by conda (Anaconda or Minoconda) in Windows.

Pavian is a interactive browser application for analyzing and visualization metagenomics classification results from classifiers such as Kraken, Centrifuge and MetaPhlAn. Here are a few tips for Pavian to work with large data.

Viewing and annotation of a huge phylogenetic tree, especially with hundreds or even thousamds taxa, is always a problem. This post provides a method to split a phylogenetic tree into multiple pages of a PDF file by pdfposter.

BEAST (and BEAST 2, of course) is widely uesed for phylogenetic inference. But it is quite complicated. This post represents some useful tips while using BEAST.